Whatever is written in the mission file will be used. Of course, they'll behave according to new AI routines.
You can check mission files what level they are. There is a line with something like this
Skill 1
The number determines AI skill level. AFAIK, 0 - Rookie and 3 is ACE.
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A designer knows he has achieved perfection not when there is nothing left to add, but when there is nothing left to take away.
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