I've had no problems with the flight controls, although I did have an issue with throttle - that was down to one of the twin engine throttles somehow being reversed, with the result that when flying single-engine the throttles were in conflict and became a binary switch.
This sounds a bit like what you're describing, perhaps?
Anyway, resolving the conflict sorted it out, so perhaps you've got two controls trying to drive the ailerons?
I think (it's a week ago, so not sure anymore!) that I assigned all the controls after I noticed it saw Joysticks 1 and 2 in the control panel, and when I assigned the axes some did change from 2 to 1.
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